The Primer Generator



Original nucleotide sequence GAGGCCTCTCGCTTG
Original protein sequence EASRL
Desired amino acid sequence EARRL
Use of restriction enzymes with site size less than 5 bp No
Use of only most common restriction enzymes No
Maximum number of substitutions compared to original sequence 3


The following primers have been generated:

Primer Sequence

Deleted Restriction Sites

Cut Positions

New Restriction Sites

Cut Positions

Number of Substitutions

 

AatI

4

     
 

Eco147I

4

     

GAGGCCCGTCGCTTG

Pme55I

4

None

 

2

 

SseBI

4

     
 

StuI

4

     
 

AatI

4

AsuC2I

6, 7

 
 

Eco147I

4

BcnI

6, 7

 

GAGGCCCGGCGCTTG

Pme55I

4

Bsp143II

12, 8

3

 

SseBI

4

BstH2I

12, 8

 
 

StuI

4

HaeII

12, 8

 
     

NciI

6, 7